The 27 MRC-s that are currently affiliated with the Mission are as follows :

• Bhandarkar Oriental Research Institute,Pune


• Central Institute of Buddhist Studies,Leh


• French Institute of Pondicherry


• Khuda Baksh Oriental Public Library,Patna


• Manipur State Archives,Imphal


• Oriental Research Institute,Mysore


• Orissa State Museum,Bhubaneswar


• Rajasthan Oriental Research Institute,Jodhpur


• Rampur Raza Library,Rampur


• Archives Cell, Krishna Kanta Handiqui Library,Guwahati University,Guwahati


• Department of Manuscriptology,Kannada University,Hampi


• Kameshwar Singh Darbhanga Sanskrit University ,Darbhanga


• Lalbhai Dalpatbhai Institute of Indology,Ahmedabad


• Sri Venkateswara Oriental Research Institute,Tirupati


• Tanjore Maharaja Serfoji Saraswati Mahal Library,Thanjavur


• Vishveshvarananda Biswabandhu Institute of Sanskrit and Indological Studies,Hoshiarpur


• Scindhia Oriental Research Institute, Vikram University ,Ujjain


• Directorate of Archeology, Archives and Museum,Srinagar


• Calcutta University,Kolkata


• Oriental Research Institute and Manuscript Library,University of Kerala,Thiruvananthapuram


• Kurukshetra University, Kurukshetra


• Library of Tibetan Works and Archives, Dharamsala


• Thunchan Memorial Trust,Tirur


• University of Madras,Chennai


• Sri Chandrasekharendra Sarasvati Visvavidyalaya, Kancheepuram


• Kavikulaguru Kalidas Sanskrit University, Ramtek


• Mahabharata Samshodhana Pratishthanam, Bangalore